Original articles in indexed journals - Functional Genomics

Costa D, Bonet N, Solé A, González de Aledo-Castillo JM, Sabidó E, Casals F, Rovira C, Nadal A, Marin JL, Cobo T, Castelo R. Genome-wide postnatal changes in immunity following fetal inflammatory response. FEBS J, 2021; 288(7): 2311-2331. PMID: 33006196 . DOI: 10.1111/febs.15578.

2021

Original articles in indexed journals - Functional Genomics

Roverato A, Castelo R. ​Path weights in concentration graphs​. Biometrika, asaa010 DOI: 10.1093/biomet/asaa010 .

2020

Original articles in indexed journals - Functional Genomics

Puigdevall P, Piccari L, Blanco I, Barbera JA, Geiger D, Badenas C, Mila M, Castelo R, Madrigal I. Genetic linkage analysis of a large family identifies FIGN as a candidate modulator of reduced penetrance in heritable pulmonary arterial hypertension. J Med Genet, 2019; 56(7): 481-490. PMID: 30894412 . DOI: 10.1136/ jmedgenet-2018-105669.

2019

Original articles in indexed journals - Integrative Biomedical Informatics - Functional Genomics

Gea J, Pascual S, Castro-Acosta AA, Hernández-Carcereny C, Castelo R, Marquez-Martin E, Montón C, Palou A, Faner R, Furlong LI, Seijo L, Sanz F, Torà M, Vilaplana C, Casadevall C, López-Campos JL, Monsó E, Peces-Barba G, Cosio BG, Agustí A, Anexo. Miembros del grupo BIOMEPOC. The BIOMEPOC Project: Personalized Biomarkers and Clinical Profiles in Chronic Obstructive Pulmonary Disease. Arch Bronconeumol, 2019; 55(2): 93-99. PMID: 30343952 . DOI: 10.1016/j.arbres.2018.07.026.

2019

Original articles in indexed journals - Functional Genomics

Puigdevall P, Castelo R. GenomicScores: seamless access to genomewide position-specific scores from R and Bioconductor. Bioinformatics, 2018; bty311. PMID: 29718111 . DOI: 10.1093/bioinformatics/bty311.

2018

Original articles in indexed journals - Functional Genomics

Roverato A, Castelo R. The networked partial correlation and its application to the analysis of genetic interactions.J R STAT SOC C-APPL, 2017; 66 : 3: 647-665 DOI: 10.1111/rssc.12166.

2017

Original articles in indexed journals - Functional Genomics

Kannan L, Ramos M, Re A, El-Hachem N, Safikhani Z, Gendoo DMA, Davis S, Gomez-Cabrero D, Castelo R, Hansen KD, Carey VJ, Morgan M, Culhane AC, Haibe-Kains B, Waldron L. Public data and open source tools for multi-assay genomic investigation of disease. Brief Bioinform, 2016; 17 (4): 603-615; SI . PMID: 26463000 . DOI: 10.1093/bib/bbv080 JUL 2016.

2016

Original articles in indexed journals - Functional Genomics

Hänzelmann S, Wang J, Guney E, Tang Y, Zhang E, Axelsson AS, Nenonen H, Salehi A, Wollheim CB, Zetterberg E, Berntorp E, Costa IG, Castelo R, Rosengren A. Thrombin stimulates insulin secretion via protease-activated receptor-3. Islets, 2016; 7 (4) . PMID: 26742564 . DOI: 10.1080/19382014.2015.1118195.

2016

Original articles in indexed journals - Functional Genomics

Costa D, Castelo R. Umbilical cord gene expression reveals the molecular architecture of the fetal inflammatory response in extremely preterm newborns. Pediatr Res, 2015; 79: 473-481 . PMID: 26539667 . DOI: 10.1038/pr.2015.233.

2015

Original articles in indexed journals - Functional Genomics

Baumstark R, Hänzelmann S, Tsuru S, Schaerli Y, Francesconi M, Mancuso FM, Castelo R, Isalan M. The propagation of perturbations in rewired bacterial gene networks. Nat Commun, 2015; 6: 10105 . PMID: 26670742 . DOI: 10.1038/ncomms10105.

2015