Original articles in indexed journals - Systems Pharmacology

Nonell-Canals A, Mestres J. In silico target profiling of one billion molecules. Mol Inform, 2011; 30: 405-409

2011

PhD Thesis - Evolutionary Genomics - Computational Genomics - group

Ledda, A. Distribution and evolution of short sequence tandem repeats in eukaryotic genomes. Universitat Pompeu Fabra. Director: Mar Alba. Mayo 2011

2011

Original articles in indexed journals - Computational Genomics - group

Perez-Llamas C, Lopez-Bigas N. Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps. PLOS ONE, 2011; 6(5): e19541. PMID: 21602921 . DOI: 10.1371/journal.pone.0019541.

2011

Original articles in indexed journals - Computational Genomics - group

Gonzalez-Perez A, Lopez-Bigas N. Improving the assessment of the outcome of non-synonymous SNVs with a Consensus deleteriousness score (Condel). AJHG, 2011; 88 (4): 440-449. PMID: 21457909 . DOI: 10.1016/j.ajhg.2011.03.004.

2011

Original articles in indexed journals - Computational Science

Harvey MJ, De Fabritiis G. Swan: A tool for porting CUDA programs to OpenCL. Comp Phys Commun, 2011. 182: 1093 DOI: 10.1016/j.cpc.2010.12.052.

2011

Original articles in indexed journals - Structural Bioinformatics

Feliu E, Aloy P, Oliva B. On the analysis of protein-protein interactions via knowledge-based potentials for the prediction of protein-protein docking. Protein Sci 2011; 20(3):529-41. PMID: 21213252 . DOI: 10.1002/pro.585.

2011

Original articles in indexed journals - Computational Genomics - group - Functional Genomics

Hartmann B, Castelo R, Miñana B, Peden E, Blanchette M, Rio DC, Singh R, Valcárcel J. Distinct regulatory programs establish widespread sex-specific alternative splicing in Drosophila melanogaster. Rna, 2011. 17(3):453-68. PMID: 21233220 . DOI: 21233220.

2011

Original articles in indexed journals - Computational Biochemistry

Maier D, Kalus W, Wolff M, Kalko SG, Roca J, Mas IM, Turan N, Cascante M, Falciani F, Hernández M, Villa-Freixa J, Losko S. Knowledge Management for Systems Biology; a general and visually driven framework applied to translational medicine. BMC Syst Biol, 2011; vol 5; 38. PMID: 21375767 . DOI: 10.1186/1752-0509-5-38.

2011

Book chapters - Computational RNA Biology - Computational Genomics - group

Agirre E, Eyras E. Databases and resources for human small non-coding RNAs. Hum Genomics, 2011. 5(3):192-9. PMID: 21504869 .

2011

Original articles in indexed journals - PharmacoInformatics

Blasi D, Arsequell A, Valencia G, Nieto J, Planas A, Pinto M, Centeno NB, Abad-Zapatero C, Quintana J. Retrospective Mapping of SAR Data for TTR Protein in Chemico-Biological Space Using Ligand Efficiency Indices as a Guide to Drug Discovery Strategies. Molecular Informatics, 2011. 30(2-3):161-167. PMID: 21838431 . DOI: 10.1002/minf.201000157.

2011