PhD Thesis - Structural Bioinformatics

García J. Protein-protein interaction network: management of databases and its applications on the computational study of protein-protein interactions. Universitat Pompeu Fabra. January 23th 2015. Thesis Director: Oliva B.

2015

Original articles in indexed journals - Computational RNA Biology

Coelho MB, Attig J, Bellora N, König J, Hallegger M, Kayikci M, Eyras E, Ule J, Smith CW. Nuclear matrix protein Matrin3 regulates alternative splicing and forms overlapping regulatory networks with PTB. EMBO JOURNAL, 34 (5): 653-668. PMID: 25599992 .

2015

Original articles in indexed journals - Computational Science

Arena S, Bellosillo B, Siravegna G, Martinez A, Canadas I, Lazzari L, Ferruz N, Russo M, Misale S, Gonzalez I, Iglesias M, Gavilan E, Corti G, Hobor S, Crisafulli G, Salido M, Sanchez J, Dalmases A, Bellmunt J, De Fabritiis G, Rovira A, Di Nicolantonio F, Albanell J, Bardelli A, Montagut C. Emergence of multiple EGFR extracellular mutations during cetuximab treatment in colorectal cancer. Clin Cancer Res, 2015; 21 (9): 2157-2166 . PMID: 25623215 . DOI: 10.1158/1078-0432.CCR-14-2821.

2015

PhD Thesis - Structural Bioinformatics

Bonet J. Exploiting protein fragments in protein modelling and function prediction. Universitat Pompeu Fabra. January 30th 2015. Thesis Director: Oliva B.

2015

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics - Computational Science - GPCR Drug Discovery

Marti-Solano M, Iglesias A, de Fabritiis G, Sanz F, Brea J, Loza MI, Pastor M, Selent J. Detection of New Biased Agonists for the Serotonin 5-HT2A Receptor: Modeling and Experimental Validation. Mol Pharmacol, 2015; 87 (4): 740-746 . PMID: 25661038 . DOI: 10.1124/mol.114.097022.

2015

Original articles in indexed journals - Systems Pharmacology

Baumann K, Ecker GF, Mestres J, Schneider G. Systems Approaches and Big Data in Molecular Informatics. Mol Inf, 34 (1): 2-2 DOI: 10.1002/minf.201580131 JAN 2015.

2015

Original articles in indexed journals - Computational RNA Biology

Agirre E, Bellora N, Allo M, Pages A, Bertucci P, Kornblihtt AR, Eyras E. A chromatin code for alternative splicing involving a putative association between CTCF and HP1 alpha proteins. BMC Biology, 2015; 13. PMID: . DOI: 10.1186/s12915-015-0141-5 MAY 2 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Agusti A, Antó JM, Auffray C, Barbé F, Barreiro E, Dorca J, Escarrabill J, Faner R, Furlong LI, Garcia-Aymerich J, Gea J, Lindmark B, Monsó E, Plaza V, Puhan MA, Roca J, Ruiz-Manzano J, Sampietro-Colom L, Sanz F, Serrano L, Sharpe J, Sibila O, Silverman EK, Sterk PJ, Sznajder JI. Personalized Respiratory Medicine: Exploring the Horizon, Addressing the Issues. Am J Resp Crit Care, 2014; 191 (4): 391-401. PMID: 25531178 . DOI: 10.1164/rccm.201410-1935PP.

2014

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Cases M, Briggs K, Steger-Hartmann T, Pognan F, Marc P, Kleinöder T, Schwab CH, Pastor M, Wichard J, Sanz F. The eTOX Data-Sharing Project to Advance in Silico Drug-Induced Toxicity Prediction. Int J Mol Sci, 2014; 15(11): 21136-21154. PMID: 25405742 . DOI: 10.3390/ijms151121136.

2014

Original articles in indexed journals - Systems Pharmacology

Antolin A, Mestres J. Distant Polypharmacology among MLP Chemical Probes. ACS Chem Biol, 2014;10 (2): 395-400
. PMID: 25365788 . DOI: 10.1021/cb500393m.

2014