Original articles in indexed journals - Computational RNA Biology

Kremsky I, Bellora N, Eyras E. A Quantitative Profiling Tool for Diverse Genomic Data Types Reveals Potential Associations between Chromatin and Pre-mRNA Processing. PLoS One, 2015; 10(7): e0132448. PMID: 26207626 . DOI: 10.1371/journal.pone.0132448. eCollection 2015.

2015

Original articles in indexed journals - Computational RNA Biology

Gonzalez-Vallinas J, Pages A, Singh B, Eyras E. A semi-supervised approach uncovers thousands of intragenic enhancers differentially activated in human cells. BMC Genomics, 2015; 16. PMID: 26169177 . DOI: 10.1186/s12864-015-1704-0.

2015

PhD Thesis - Computational RNA Biology

Kremsky IJ. Assessing the relationship between chromatin and splicing factors in alternative splicing. Universitat Pompeu Fabra. July 14th 2015. Thesis Director: Eyras E.

2015

Original articles in indexed journals - Structural Bioinformatics

Oliva B, Fernandez-Fuentes N. Knowledge-based modeling of peptides at protein interfaces: PiPreD. Bioinformatics, 2015; 31 (9): 1405-1410. PMID: 25540186 . DOI: 10.1093/bioinformatics/btu838 MAY 1 2015.

2015

Original articles in indexed journals - Computational Science

Harvey MJ, De Fabritiis G. AceCloud: Molecular Dynamics Simulations in the Cloud. Journal of Chemical Information and Modeling, 2015; 55 (5):909-914. PMID: 25849093 . DOI: 10.1021/acs.jcim.5b00086 MAY 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Sanz F, Carrio P, Lopez O, Capoferri L, Kooi DP, Vermeulen NPE, Geerke DP, Montanari F, Ecker GF, Schwab CH, Kleinoder T, Magdziarz T, Pastor M. Integrative Modeling Strategies for Predicting Drug Toxicities at the eTOX Project. Mol Inform, 2015; 34 (6-7):477-484; SI DOI: 10.1002/minf.201400193.

2015

Original articles in indexed journals - Computational RNA Biology

Alamancos GP, Pagès A, Trincado JL, Bellora N, Eyras E. Leveraging transcript quantification for fast computation of alternative splicing profiles. RNA, 2015; 21 (9): 1521-1531
. PMID: 26179515 . DOI: 10.1261/rna.051557.115 SEP 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Fehér T, Libis V, Carbonell P, Faulon JL. A Sense of Balance: Experimental Investigation and Modeling of a Malonyl-CoA Sensor in Escherichia coli. Front Bioeng Biotechnol, 2015; 3: 46 . PMID: 25905101 . DOI: 10.3389/fbioe.2015.00046. eCollection 2015..

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Gutiérrez-Sacristán A, Grosdidier S, Valverde O, Torrens M, Bravo A, Piñero J, Sanz F, Furlong LI. PsyGeNET: a knowledge platform on psychiatric disorders and their genes. Bioinformatics, 2015; 31 (18): 3075-3077 . PMID: 25964630 . DOI: 10.1093/bioinformatics/btv301 SEP 15 2015.

2015

Other - Integrative Biomedical Informatics

Mayer MA, Furlong LI, Torre P, Planas I, Cots F, Izquierdo E, Portabella J, Rovira J, Gutierrez-Sacristan A, Sanz F. Reuse of EHRs to Support Clinical Research in a Hospital of Reference. Stud Health Technol Inform, 2015; 210: 224-6. PMID: 25991136 .

2015