PhD Thesis - Structural Bioinformatics

Poglayen D. Discovery of biological paths activating main regulators Application on Salmonella infection and drug-drug interacions. Universitat Pompeu Fabra, January 28th 2016. Thesis Director: Oliva B.

2016

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

Carrio P, Sanz F, Pastor M. Towards a unifying strategy for the structure-based prediction of toxicological endpoints. Arch Toxicol, 2015 . PMID: 26553148 . DOI: 10.1007/s00204-015-1618-2.

2015

Original articles in indexed journals - Functional Genomics

Costa D, Castelo R. Umbilical cord gene expression reveals the molecular architecture of the fetal inflammatory response in extremely preterm newborns. Pediatr Res, 2015; 79: 473-481 . PMID: 26539667 . DOI: 10.1038/pr.2015.233.

2015

Original articles in indexed journals - Functional Genomics

Baumstark R, Hänzelmann S, Tsuru S, Schaerli Y, Francesconi M, Mancuso FM, Castelo R, Isalan M. The propagation of perturbations in rewired bacterial gene networks. Nat Commun, 2015; 6: 10105 . PMID: 26670742 . DOI: 10.1038/ncomms10105.

2015

PhD Thesis - Integrative Biomedical Informatics

Piñero J. Computational approaches and resources to support translational research in human diseases. University Pompeu Fabra. Thesis Director: Furlong LI. December 17, 2015.

2015

PhD Thesis - PharmacoInformatics

Carrió P. Development of advanced strategies for the prediction of toxicity endpoints in drug development. University Pompeu Fabra. Thesis Director: Pastor, M. December 11, 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Trosset JY, Carbonell P. Synthetic biology for pharmaceutical drug discovery. Drug Des Devel Ther, 2015; 9: 6285-6302 . PMID: 26673570 . DOI: 10.2147/DDDT.S58049. eCollection 2015.

2015

Original articles in indexed journals - Integrative Biomedical Informatics

Abascal MF, Besso MJ, Rosso M, Mencucci MV, Aparicio E, Szapiro G, Furlong LI, Vázquez-Levin MH*. CDH1/E-cadherin and solid tumors. An updated gene-disease association analysis using bioinformatics tools. Comput Biol Chem. 2015; 60: 9-20 . PMID: 26674224 . DOI: 10.1016/j.compbiolchem.2015.10.002 FEB 2016.

2015

Original articles in indexed journals - Evolutionary Genomics

Ruiz-Orera J, Hernandez-Rodriguez J, Chiva C, Sabidó E, Kondova I, Bontrop R, Marqués-Bonet T, Alba MM. Origins of De Novo Genes in Human and Chimpanzee. PLoS Genet, 2015; 11(12) :e1005721. PMID: 26720152 . DOI: 10.1371/journal.pgen.1005721. eCollection 2015.

2015

Original articles in indexed journals - GPCR Drug Discovery

Kaczor AA, Rutkowska E, Bartuzi D, Targowska-Duda KM, Matosiuk D, Selent J. Computational methods for studying G protein-coupled receptors (GPCRs). Method Cell Biol, 2016; 132: 359-399 . PMID: 26928552 . DOI: 10.1016/bs.mcb.2015.11.002.

2015