Original articles in indexed journals - Systems Pharmacology

Falaguera M, Mestres J. Illuminating the Chemical Space of Untargeted Proteins. Journal of Chemical Information and Modeling, 2023. . PMID: 37074232 . DOI: 10.1021/acs.jcim.2c01364.

2023

Original articles in indexed journals - Integrative Biomedical Informatics

Piñero J, Rodriguez Fraga PS, Valls-Margarit J, Ronzano F, Accuosto P, Lambea Jane R, Sanz F, Furlong LI. Genomic and proteomic biomarker landscape in clinical trials. Comput Struct Biotechnol J, 2023; 21: 2110-2118. PMID: 36968019 . DOI: 10.1016/j.csbj.2023.03.014.

2023

PhD Thesis - Integrative Biomedical Informatics

Pérez Granado J. Genetic associations on major depression: curation and functional analysis. Universitat Pompeu Fabra. March, 8th 2023. Thesis Directors: Piñero J, Furlong LI. 

2023

Original articles in indexed journals - Structural Bioinformatics

Junet V, Matos-Filipe P, García-Illarramendi JM, Ramírez E, Oliva B, Farres J^*, Daura X^*, Mas JM, Morales R. A decision support system based on artificial intelligence and systems biology for the simulation of pancreatic cancer patient status. CPT Pharmacometrics Syst Pharmacol, 2023. . PMID: 37002678 . DOI: 10.1002/psp4.12961.

2023

Reviews in indexed journals - Structural Bioinformatics

Bota PM, Hernández AC, Segura J, Gallego O, Oliva B^*, Fernandez-Fuentes N^*. CM2D3: Furnishing the Human Interactome with Structural Models of Protein Complexes Derived by Comparative Modeling and Docking. J Mol Biol, 2023. . PMID: 36958605 . DOI: 10.1016/j.jmb.2023.168055.

2023

Original articles in indexed journals - Integrative Biomedical Informatics - PharmacoInformatics

March-Vila E, Ferretti G, Terricabras E, Ardao I, Brea JM, Varela MJ, Arana Á, Rubiolo JA, Sanz F, Loza MI, Sánchez L, Alonso H, Pastor M. A continuous in silico learning strategy to identify safety liabilities in compounds used in the leather and textile industry. Arch Toxicol, 2023; 97:1091-1111. PMID: 36781432 . DOI: 10.1007/s00204-023-03459-7.

2023

Original articles in indexed journals - NeuroGenomics

Juan D, Santpere G, Kelley JL et al. Current advances in primate genomics: novel approaches for understanding evolution and disease. Nat Rev Genet, 2023. PMID: 36599936 . DOI: 10.1038/s41576-022-00554-w.

2023

Original articles in indexed journals - PharmacoInformatics

Rodríguez-Belenguer P, Kopańska K, Llopis-Lorente J, Trenor B, Saiz J, Pastor M. Application of machine learning to improve the efficiency of electrophysiological simulations used for the prediction of drug-induced ventricular arrhythmia. Comput Methods Programs Biomed, 2023; 230: 107345. PMID: 36689808 . DOI: 10.1016/j.cmpb.2023.107345.

2023

Original articles in indexed journals - GPCR Drug Discovery

Jobin ML, De Smedt-Peyrusse V, Ducrocq F, Baccouch R, Oummadi A, Pedersen MH, Medel-Lacruz B, Angelo MF, Villette S, Van Delft P, Fouillen L, Mongrand S, Selent J, Tolentino-Cortez T, Barreda-Gómez G, Grégoire S, Masson E, Durroux T, Javitch JA, Guixà-González R, Alves ID, Trifilieff P. Impact of membrane lipid polyunsaturation on dopamine D2 receptor ligand binding and signaling. Mol Psychiatry, 2023. PMID: 36604603 . DOI: 10.1038/s41380-022-01928-6.

2023

Original articles in indexed journals - Integrative Biomedical Informatics

Callegaro G, Schimming JP, Piñero González J, Kunnen SJ, Wijaya L, Trairatphisan P, van den Berk L, Beetsma K, Furlong LI, Sutherland JJ, Mollon J, Stevens JL, van de Water B. Identifying multiscale translational safety biomarkers using a network-based systems approach. iScience, 2023; 31;26(3): 106094. PMID: 36895646 . DOI: 10.1016/j.isci.2023.106094.

2023