Tools
Results 11 - 20 of about 44
Original articles in indexed journals - Computational Biochemistry - Computational Science
Guix FX, Ill-Raga G, Bravo R, Nakaya T, de Fabritiis G, Coma M, Miscione GP, Villa-Freixa J, Suzuki T, Fernandez-Busquets X, Valverde MA, de Strooper B, Muñoz FJ. Amyloid-dependent triosephosphate isomerase nitrotyrosination induces glycation and tau fibrillation. Brain, 2009;132(Pt 5):1335-45. PMID: 19251756 . DOI: 10.1093.
2009
Original articles in indexed journals - Structural Bioinformatics - Computational Biochemistry
Scheper J, Oliva B, Villa-Freixa J, Thomson TM. Analysis of electrostatic contributions to the selectivity of interactions between RING-finger domains and ubiquitin-conjugating enzymes. Proteins, 2009; 74(1): 92-103. PMID: 18615712 . DOI: 10.1002/prot.22120.
2009
Original articles in indexed journals - Computational Biochemistry - Computational Science
de Fabritiis G, Coveney PV, Villà-Freixa, J.Energetics of K+ permeability through Gramicidin A by forward-reverse steered molecular dynamics.Proteins: Structure, Function and Bioinformatics 2008 Oct;73(1):185-94.
2008
Original articles in indexed journals - Computational Biochemistry - Computational Science
de Fabritiis G, Villa-Freixa J, Coveney PV. Multiscale modelling of permeation through membrane channels using pregenerated molecular dynamics trajectories. Int J Mod Phys C, 2007; 20(19): 1-9
2007
Original articles in indexed journals - Computational Biochemistry
Johnston MA, Villa-Freixa J. Enabling Data Sharing and Collaboration in Complex Systems Applications. Bioinformatics, 2007; 124-40
2007
Original articles in indexed journals - Computational Biochemistry
Bonet J, Caltabiano G, Khan AK, Johnston MA, Corbí C, Gomez A, Rovira X, Teyra J; Villa-Freixa J. The Role of Residue Stability in Transient Protein-Protein Interactions involved in Enzymatic Phosphate Hydrolysis. A computational Study. Proteins, 2006; 63: 65–77. PMID: 16374872 . DOI: 10.1002/prot.20791.
2006
Original articles in indexed journals - Computational Biochemistry
Johnston MA, Fernandez-Galvan I, Villa-Freixa J. Framework-based design of a new all-purpose molecular simulation application: The Adun Simulator. J Comput Chem, 2005; 26 (15): 1647-59. PMID: 16175583 . DOI: 10.1002/jcc.20312.
2005
Original articles in indexed journals - Integrative Biomedical Informatics - Computational Biochemistry
Barbany M, Gutierrez-de-Teran H, Sanz F, Villa-Freixa J. Towards a MIP-based alignment and docking in computer-aided drug design. Proteins, 2004; 56: 585-94
2004
Original articles in indexed journals - Computational Biochemistry
Villà-Freixa J. Review of the book: Thermodynamics of Biochemical Reactions. Robert A. Alberty. John Wiley & Sons; 2003. ChemPhysChem 2004; 5: 285-8.
2004
Original articles in indexed journals - Integrative Biomedical Informatics - Computational Biochemistry
Barbany M, Gutierrez-de-Teran H, Sanz F, Villa-Freixa J, Warshel A. On the generation of catalytic antibodies by transition state analogs. ChemBioChem, 2003; 4: 277-85
2003
