Original articles in indexed journals - Structural Bioinformatics

Aragüés R, Sander C, Oliva B. Predicting cancer involvement of genes from heterogeneous data. BMC Bioinformatics. 2008 Mar;9:172.. PMID: 18371197 .

2008

Original articles in indexed journals - Structural Bioinformatics

Aguilar D, Oliva B. Topological comparison of methods for predicting transcriptional cooperativity in yeast. BMC Genomics. 2008 Mar;9:137.. PMID: 18366726 .

2008

Original articles in indexed journals - Structural Bioinformatics

Martín B, Aragüés R, Sanz R, Oliva B, Boluda S, Martínez A, Sierra A. Biological pathways contributing to organ-specific phenotype of brain metastatic cells. J Proteome Res. 2008 Mar;7(3).908-20.. PMID: 18257520 .

2008

Original articles in indexed journals - Structural Bioinformatics

Hermoso A, Espadaler J, Stresing V, Querol E, Francesc XAm Stenberg MJE, Oliva B, Fernandez-Fuentes N. Including functional annotations and extending the collection of structural classifications of protein loops (ArchDB). Bioinformatics and Biology Insights. 2007;1:77-90.. PMID: 20066127 .

2007

Original articles in indexed journals - Structural Bioinformatics

Moreno-Estrada A, Casals F, Ramírez-Soriano A, Oliva B, Calafell F, Bertranpetit J, Bosch E. Signatures of selection in the human olfactory receptor OR5I1 gene. Mol Biol Evol, 2008; 25(1): 144-54. . PMID: 17981927 .

2007

Original articles in indexed journals - Structural Bioinformatics

Sanz R, Aragüés R, Stresing V, Martín B, Landemaine T, Oliva B, Driouch K, Lidereau R, Sierra A. Functional pathways shared by liver and ling metastases: a mitochondrial chaperone machine is up-regulated in soft-tissue breast cancer metastasis. Clin Exp Metastasis. 2007;24(8).673-83.. PMID: 18008173 .

2007

Original articles in indexed journals - Structural Bioinformatics

Aragues R, Sali A, Bonet J, Marti-Renom MA, Oliva B. Characterization of protein hubs by inferring interacting motifs from protein interactions. PLoS Comput Biol. 2007 Sep;3(9):1761-71.. PMID: 17941705 .

2007

Original articles in indexed journals - Structural Bioinformatics

Cockell SJ, Oliva B, Jackson RM. Structure-based evaluation of in silico predictions of protein-protein interactions using Comparative Docking. Bioinformatics. 2007 Mar;23(5):573-81.. PMID: 17237047 .

2007

PhD Thesis - Structural Bioinformatics

Aragués R. Protein Interaction networks and their applications to protein characterization and cancer genes prediction. Universitat Pompeu Fabra. Director: Oliva B. 2007

2007

Original articles in indexed journals - Structural Bioinformatics

Gargallo R, Cedano J, Mozo-Villarias A, Querol E, Oliva B. Study of the influence of temperature on the dynamics of the catalytic cleft in 1,3-1,4-beta-glucanase by molecular dynamics simulations. J Mol Model. 2006; 12(6): 835-45.. PMID: 16525847 . DOI: 10.1007/s00894-006-0110-6.

2006