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Ruiz-Orera J, Villanueva-Cañas J, Blevins W, Albà MM. De novo gene evolution: How do we transition from non-coding to coding?. PeerJ preprints 5 (e3031v2), 2017 DOI: 10.7287/peerj.preprints.3031v2.
2017
Blevins wr, Albà MM, Carey L. Comparative transcriptomics and ribo-seq: Looking at de novo gene emergence in Saccharomycotina. PeerJ preprints 5 (e3030v1), 2017 DOI: 10.7287/peerj.preprints.3030v1.
2017
Original articles in indexed journals - Evolutionary Genomics
Domazet-Loso T, Carvunis AR, Alba MM, Sestak MS, Bakaric R, Neme R, Tautz D. No evidence for phylostratigraphic bias impacting inferences on patterns of gene emergence and evolution. Mol Biol Evol, 2017; 34 (4): 843-856 . PMID: 28087778 . DOI: 10.1093/molbev/msw284 APR 2017.
2017
PhD Thesis - Evolutionary Genomics
Ruiz-Orera J. Understanding the mechanisms of de novo gene evolution using transcriptomics data. Universitat Pompeu Fabra. January, 19th 2017. Thesis Director: Alba MM.
2017
Original articles in indexed journals - Evolutionary Genomics
Abascal F, Corvelo A, Cruz F, Villanueva-Cañas JL, Vlasova A, Marcet-Houben M, Martínez-Cruz B, Cheng JY, Prieto P, Quesada V, Quilez J, Li G10, García F, Rubio-Camarillo M, Frias L, Ribeca P, Capella-Gutiérrez S, Rodríguez JM, Câmara F, Lowy E, Cozzuto L, Erb I, Tress ML, Rodriguez-Ales JL, Ruiz-Orera J, Reverter F, Casas-Marce M, Soriano L, Arango JR, Derdak S, Galán B, Blanc J, Gut M, Lorente-Galdos B, Andrés-Nieto M, López-Otín C, Valencia A, Gut I, García JL, Guigó R, Murphy WJ, Ruiz-Herrera A, Marques-Bonet T, Roma G, Notredame C, Mailund T, Alba MM, Gabaldón T, Alioto T, Godoy JA. Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx. Genome Biol, 2016; 14; 17(1): 251 . PMID: 27964752 . DOI: 10.1186/s13059-016-1090-1.
2016
Original articles in indexed journals - Evolutionary Genomics
Faherty SL, Villanueva-Cañas JL, Klopfer PH, Alba MM, Yoder AD. Gene expression profiling in the hibernating primate, Cheirogaleus medius. Genome Biol Evol, 2016; 8 (8): 2413-2426 . PMID: 27412611 . DOI: 10.1093/gbe/evw163.
2016
Original articles in indexed journals - Evolutionary Genomics
Vartia S, Villanueva-Cañas JL, Finarelli J, Farrell ED, Collins PC, Hughes GM, Carlsson JE, Gauthier DT, McGinnity P, Cross TF, FitzGerald RD, Mirimin L, Crispie F, Cotter PD, Carlsson J. A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding. R Soc Open Sci, 2016; 3(1): 150565 . PMID: 26909185 . DOI: 10.1098/rsos.150565. eCollection 2016.
2016
Original articles in indexed journals - Evolutionary Genomics
Ruiz-Orera J, Hernandez-Rodriguez J, Chiva C, Sabidó E, Kondova I, Bontrop R, Marqués-Bonet T, Alba MM. Origins of De Novo Genes in Human and Chimpanzee. PLoS Genet, 2015; 11(12) :e1005721. PMID: 26720152 . DOI: 10.1371/journal.pgen.1005721. eCollection 2015.
2015
PhD Thesis - Evolutionary Genomics
Villanueva-Cañas JL. Insights into mammalian adaptive evolution through genomics data. University Pompeu Fabra. Thesis Director: Albà MM. November 20, 2015.
2015
Original articles in indexed journals - Evolutionary Genomics
Subirana JA, Albà MM, Messeguer X. High evolutionary turnover of satellite families in Caenorhabditis. BMC Evol Biol, 2015; 15(1):218 . PMID: 26438045 . DOI: 10.1186/s12862-015-0495-x.
2015
