Original articles in indexed journals - Computational RNA Biology

Singh B, Eyras E. The role of alternative splicing in cancer. Transcription,  2017; 8(2): 91-98. PMID: 28005460 . DOI: 10.1080/21541264.2016.1268245.

2017

Original articles in indexed journals - Computational RNA Biology

Middleton R, Gao D, Thomas A, Singh B, Au A, Wong JJ, Bomane A, Cosson B, Eyras E, Rasko JE, Ritchie W. IRFinder: assessing the impact of intron retention on mammalian gene expression. Genome Biol, 2017; 18(1):51 . PMID: 28298237 . DOI: 10.1186/s13059-017-1184-4.

2017

Original articles in indexed journals - Computational RNA Biology

Llorian M, Gooding C, Bellora N, Hallegger M, Buckroyd A, Wang X, Rajgor D, Kayikci M, Feltham J, Ule J, Eyras E, Smith CWJ. The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators. Nucleic Acids Res, 2016; 44 (18): 8933-8950 . PMID: 27317697 . DOI: 10.1093/nar/gkw560 OCT 14 2016.

2016

Original articles in indexed journals - Computational RNA Biology

Pérez-Guijarro E, Karras P, Cifdaloz M, Martínez-Herranz R, Cañón E, Graña O, Horcajada-Reales C, Alonso-Curbelo D, Calvo TG, Gómez-López G, Bellora N, Riveiro-Falkenbach E, Ortiz-Romero PL, Rodríguez-Peralto JL, Maestre L, Roncador G, de Agustín Asensio JC, Goding CR, Eyras E, Megías D, Méndez R, Soengas MS. Lineage-specific roles of the cytoplasmic polyadenylation factor CPEB4 in the regulation of melanoma drivers. Nat Commun, 2016; 7: 13418. PMID: 27857118 . DOI: 10.1038/ncomms13418.

2016

Original articles in indexed journals - Computational RNA Biology

Martin S, Bellora N, Gonzalez-Vallinas J, Irimia M, Chebli K, de Toledo M,  Raabe M, Eyras E, Urlaub H, Blencowe B, Tazi J. Preferential binding of a stable G3BP ribonucleoprotein complex to intron-retaining transcripts in mouse brain and modulation of their expression in the cerebellum. J Neurochem, 139 (3): 349-368 . PMID: 27513819 . DOI: 10.1111/jnc.13768 NOV 2016.

2016

Original articles in indexed journals - Computational RNA Biology

Rodor J, FitzPatrick DR, Eyras E, Cáceres JF. The RNA-binding landscape of RBM10 and its role in alternative splicing regulation in models of mouse early development. RNA Biol, 2016; 14 (1): 45-57 . PMID: 27763814 . DOI: 10.1080/15476286.2016.1247148 2017.

2016

Original articles in indexed journals - Computational RNA Biology

García-Martín JA, Bayegan AH, Dotu I, Clote P. RNAdualPF: software to compute the dual partition function with sample applications in molecular evolution theory. BMC Bioinformatics, 2016; 17(1): 424 . PMID: 27756204 .

2016

Original articles in indexed journals - Computational RNA Biology

Rodor J, Pan Q, Blencowe BJ, Eyras E, Cáceres JF. The RNA-binding profile of Acinus, a peripheral component of the exon junction complex, reveals its role in splicing regulation. RNA, 2016; 22 (9): 1411-1426 . PMID: 27365209 . DOI: 10.1261/rna.057158.116.

2016

Original articles in indexed journals - Computational RNA Biology

Trincado JL, Sebestyen E, Pages A, Eyras E. The prognostic potential of alternative transcript isoforms across human tumors. Genome Med, 2016; 8 (1): 85 . PMID: 27535130 . DOI: 10.1186/s13073-016-0339-3 AUG 17 2016.

2016

Original articles in indexed journals - Computational RNA Biology

Martin S, Bellora N, González-Vallinas J, Irimia M, Chebli K, DeToledo M, Raabe M, Eyras E, Urlaub H, Blencowe BJ, Tazi J. Preferential Binding of a stable G3BP Ribonucleoprotein Complex to Intron-retaining Transcripts in Mouse Brain and Modulation of their Expression in the Cerebellum. J Neurochem, 2016; . PMID: 27513819 . DOI: 10.1111/jnc.13768.

2016