Original articles in indexed journals - Computational RNA Biology

Climente-González H, Porta-Pardo E, Godzik A, Eyras E. The Functional Impact of Alternative Splicing in Cancer. Cell Rep, 2017; 20 (9): 2215-2226. PMID: 28854369 . DOI: 10.1016/j.celrep.2017.08.012.

2017

PhD Thesis - Computational RNA Biology

Singh B. Large-scale analysis of RNA processing in multiple cancers. Universitat Pompeu Fabra. May, 11th 2017. Thesis Director: Eyras E.

2017

Original articles in indexed journals - Computational RNA Biology

Singh B, Eyras E. The role of alternative splicing in cancer. Transcription,  2017; 8(2): 91-98. PMID: 28005460 . DOI: 10.1080/21541264.2016.1268245.

2017

Original articles in indexed journals - Computational RNA Biology

Middleton R, Gao D, Thomas A, Singh B, Au A, Wong JJ, Bomane A, Cosson B, Eyras E, Rasko JE, Ritchie W. IRFinder: assessing the impact of intron retention on mammalian gene expression. Genome Biol, 2017; 18(1):51 . PMID: 28298237 . DOI: 10.1186/s13059-017-1184-4.

2017

Original articles in indexed journals - Computational RNA Biology

Llorian M, Gooding C, Bellora N, Hallegger M, Buckroyd A, Wang X, Rajgor D, Kayikci M, Feltham J, Ule J, Eyras E, Smith CWJ. The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators. Nucleic Acids Res, 2016; 44 (18): 8933-8950 . PMID: 27317697 . DOI: 10.1093/nar/gkw560 OCT 14 2016.

2016

Original articles in indexed journals - Computational RNA Biology

Pérez-Guijarro E, Karras P, Cifdaloz M, Martínez-Herranz R, Cañón E, Graña O, Horcajada-Reales C, Alonso-Curbelo D, Calvo TG, Gómez-López G, Bellora N, Riveiro-Falkenbach E, Ortiz-Romero PL, Rodríguez-Peralto JL, Maestre L, Roncador G, de Agustín Asensio JC, Goding CR, Eyras E, Megías D, Méndez R, Soengas MS. Lineage-specific roles of the cytoplasmic polyadenylation factor CPEB4 in the regulation of melanoma drivers. Nat Commun, 2016; 7: 13418. PMID: 27857118 . DOI: 10.1038/ncomms13418.

2016

Original articles in indexed journals - Computational RNA Biology

Martin S, Bellora N, Gonzalez-Vallinas J, Irimia M, Chebli K, de Toledo M,  Raabe M, Eyras E, Urlaub H, Blencowe B, Tazi J. Preferential binding of a stable G3BP ribonucleoprotein complex to intron-retaining transcripts in mouse brain and modulation of their expression in the cerebellum. J Neurochem, 139 (3): 349-368 . PMID: 27513819 . DOI: 10.1111/jnc.13768 NOV 2016.

2016

PhD Thesis - Computational RNA Biology

Pages A. Computational tools for the study of RNA processing and function. Universitat Pompeu Fabra. October, 27th 2016. Thesis Directors: Guigó R/Eyras E.

2016

Original articles in indexed journals - Computational RNA Biology

Rodor J, FitzPatrick DR, Eyras E, Cáceres JF. The RNA-binding landscape of RBM10 and its role in alternative splicing regulation in models of mouse early development. RNA Biol, 2016; 14 (1): 45-57 . PMID: 27763814 . DOI: 10.1080/15476286.2016.1247148 2017.

2016

Original articles in indexed journals - Computational RNA Biology

García-Martín JA, Bayegan AH, Dotu I, Clote P. RNAdualPF: software to compute the dual partition function with sample applications in molecular evolution theory. BMC Bioinformatics, 2016; 17(1): 424 . PMID: 27756204 .

2016